=> Bootstrap dependency digest>=20010302: found digest-20121220 ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. => Checksum SHA1 OK for pymol-v1.4.1.tar.bz2 => Checksum RMD160 OK for pymol-v1.4.1.tar.bz2 ===> Installing dependencies for py26-mol-1.4.1nb4 ========================================================================== The following variables will affect the build process of this package, py26-mol-1.4.1nb4. Their current value is shown below: * PYTHON_VERSION_DEFAULT = 27 Based on these variables, the following variables have been set: * PYPACKAGE = python26 You may want to abort the process now with CTRL-C and change their value before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Build dependency x11-links>=0.72: found x11-links-0.73 => Full dependency py26-numpy-[0-9]*: found py26-numpy-1.6.2nb1 => Full dependency py26-Pmw-[0-9]*: found py26-Pmw-1.3.2 => Full dependency glew>=1.3.4: found glew-1.9.0 => Full dependency png>=1.6.0nb1: found png-1.6.1beta05 => Full dependency python26>=2.6.6nb8: found python26-2.6.8nb3 ===> Overriding tools for py26-mol-1.4.1nb4 ===> Extracting for py26-mol-1.4.1nb4 ===> Patching for py26-mol-1.4.1nb4 ===> Creating toolchain wrappers for py26-mol-1.4.1nb4 src=/usr/X11R7/lib/pkgconfig/fixesproto.pc dst=/scratch/biology/py-mol/work/.buildlink/lib/pkgconfig/fixesext.pc; /bin/mkdir -p /scratch/biology/py-mol/work/.buildlink/lib/pkgconfig; if test -f ${src}; then /bin/ln -sf ${src} ${dst}; fi ===> Configuring for py26-mol-1.4.1nb4 => Replacing python interpreter in test/cyg test/run test/show test/win.py. => Replacing csh interpreter in test/vdiff.